Uses of Class
org.biojava.nbio.structure.align.client.StructureName

Packages that use StructureName

Package	Description
org.biojava.nbio.structure.align.client	This package deals with the server communication for auto-downloading pre-calculated alignments.
org.biojava.nbio.structure.align.util
org.biojava.nbio.structure.rcsb

Uses of StructureName in org.biojava.nbio.structure.align.client

Methods in org.biojava.nbio.structure.align.client with parameters of type StructureName

Modifier and Type	Method and Description
int	StructureName.compareTo(StructureName o) Orders identifiers lexicographically by PDB ID and then full Identifier

Constructors in org.biojava.nbio.structure.align.client with parameters of type StructureName

Constructor and Description
PdbPair(StructureName name1, StructureName name2)

Uses of StructureName in org.biojava.nbio.structure.align.util

Methods in org.biojava.nbio.structure.align.util with parameters of type StructureName

Modifier and Type	Method and Description
Structure	AtomCache.getStructureForCathDomain(StructureName structureName) Returns a Structure corresponding to the CATH identifier supplied in structureName, using the the CathDatabase at CathFactory.getCathDatabase().
Structure	AtomCache.getStructureForCathDomain(StructureName structureName, CathDatabase cathInstall) Returns a Structure corresponding to the CATH identifier supplied in structureName, using the specified CathDatabase.

Uses of StructureName in org.biojava.nbio.structure.rcsb

Methods in org.biojava.nbio.structure.rcsb that return types with arguments of type StructureName

Modifier and Type	Method and Description
static SortedSet<StructureName>	GetRepresentatives.getRepresentatives(int sequenceIdentity) Returns a representative set of PDB protein chains at the specified sequence identity cutoff.