CESymmParameters.SymmetryType (biojava-structure 6.0.3 API)

java.lang.Object
- java.lang.Enum<CESymmParameters.SymmetryType>
- - org.biojava.nbio.structure.symmetry.internal.CESymmParameters.SymmetryType

All Implemented Interfaces:

Serializable, Comparable<CESymmParameters.SymmetryType>

Enclosing class:

CESymmParameters
```
public static enum CESymmParameters.SymmetryType
extends Enum<CESymmParameters.SymmetryType>
```
The internal symmetry detection can be divided into two types: CLOSE: includes the circular and dihedral symmetries, and OPEN: includes the helical and protein repeats symmetries.
All internal symmetry cases share one property: all the repeats have the same 3D transformation.
AUTO option automatically identifies the type. The criterion for classification is that the CLOSE symmetry generates CeSymm alignments with circular permutations (2 blocks in AFPChain), whereas the OPEN symmetry generates alignments without a CP (only one block in AFPChain).

Enum Constant Summary

Enum Constants
Enum Constant Description

AUTO

CLOSED

OPEN

Field Summary

Fields
Modifier and Type Field Description

static CESymmParameters.SymmetryType DEFAULT

Method Summary

All Methods Static Methods Concrete Methods
Modifier and Type	Method	Description
`static CESymmParameters.SymmetryType`	`valueOf(String name)`	Returns the enum constant of this type with the specified name.
`static CESymmParameters.SymmetryType[]`	`values()`	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait

- Enum Constant Detail
  - CLOSED
```
public static final CESymmParameters.SymmetryType CLOSED
```
  - OPEN
```
public static final CESymmParameters.SymmetryType OPEN
```
  - AUTO
```
public static final CESymmParameters.SymmetryType AUTO
```
- Field Detail
  - DEFAULT
```
public static final CESymmParameters.SymmetryType DEFAULT
```
- Method Detail
  - values
```
public static CESymmParameters.SymmetryType[] values()
```
    Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:
    for (CESymmParameters.SymmetryType c : CESymmParameters.SymmetryType.values()) System.out.println(c);
    Returns:
    
    an array containing the constants of this enum type, in the order they are declared
  - valueOf
```
public static CESymmParameters.SymmetryType valueOf(String name)
```
    Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
    
    Parameters:
    
    name - the name of the enum constant to be returned.
    
    Returns:
    
    the enum constant with the specified name
    
    Throws:
    
    IllegalArgumentException - if this enum type has no constant with the specified name
    
    NullPointerException - if the argument is null