All Classes
AlignmentTools
AtomContactRDD
AtomData
BiojavaSparkUtils
BuildUndirectedGraph
CalculateContacts
CalculateFrequency
CanonNames
ChainAligner
ChainDataRDD
ClusterEcodSequences
ClusterSequences
CountContacts
CountElements
EntryPoint
FilterCombinations
FilterRemainingSequences
FilterSignificantResults
FlatMapCluster
FragmentAndGroup
GetAverageCalphaDist
GetSubsetOfSequences
GroupDataRDD
PairwiseSequenceComparison
PairwiseSequenceComparison
PrintClusterInfo
RandomKeyAssigner
ReadFromMmcif
ShowGraph
ShowGraph.MyEdge
SimpleExample
WeightedGraph