demo

Class CountContacts

java.lang.Object

demo.CountContacts

public class CountContacts
extends Object

An example reading the PDB and finding the mean C-alpha to C-alpha distance between Proline and Lysine.

Author:

Anthony Bradley

Constructor Summary

Constructors

Constructor and Description
CountContacts()

Method Summary

Modifier and Type	Method and Description
static void	findCalphaCalphaContacts() Example of finding C-alpha C-alpha contacts.
static void	findFeHisContacts() Example of finding Fe His contacts.
static void	findNOChargedContacts() Example of finding N O charged contacts.
static void	main(String[] args) An example reading the PDB and finding the mean C-alpha to C-alpha distance between Proline and Lysine.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CountContacts

public CountContacts()

Method Detail

main

public static void main(String[] args)

An example reading the PDB and finding the mean C-alpha to C-alpha distance between Proline and Lysine.

Parameters:

args -

findCalphaCalphaContacts

public static void findCalphaCalphaContacts()

Example of finding C-alpha C-alpha contacts.

findNOChargedContacts

public static void findNOChargedContacts()

Example of finding N O charged contacts.

findFeHisContacts

public static void findFeHisContacts()

Example of finding Fe His contacts.