public class AlignmentTools extends Object implements Serializable
Atom arrays.| Constructor and Description |
|---|
AlignmentTools() |
| Modifier and Type | Method and Description |
|---|---|
static org.biojava.nbio.structure.align.model.AFPChain |
getBiojavaAlignment(org.biojava.nbio.structure.Atom[] ca1,
org.biojava.nbio.structure.Atom[] ca2,
String alignmentMethod)
Performs an alignment and returns the
AFPChain scores between two C-alpha Atom arrays. |
public static org.biojava.nbio.structure.align.model.AFPChain getBiojavaAlignment(org.biojava.nbio.structure.Atom[] ca1,
org.biojava.nbio.structure.Atom[] ca2,
String alignmentMethod)
AFPChain scores between two C-alpha Atom arrays.ca1 - the first C-alpha arrayca2 - the second C-alpha arrayalignmentMethod - the string specifying the alignment methodAFPChain pf the scores between the two input Atom arrayCopyright © 2016 Biojava. All Rights Reserved.