org.biojava.nbio.ws.hmmer

Interface HmmerScan

All Known Implementing Classes:

RemoteHmmerScan

public interface HmmerScan

Interface for performing Hmmscans on sequences.

Since:

3.0.3

Author:

Andreas Prlic

Method Summary

Modifier and Type	Method and Description
java.util.SortedSet<HmmerResult>	scan(ProteinSequence sequence)

Method Detail

scan

java.util.SortedSet<HmmerResult> scan(ProteinSequence sequence)
                               throws java.io.IOException

Throws:

java.io.IOException