HmmerDomain (biojava-ws 4.0.0 API)

java.lang.Object
- org.biojava.nbio.ws.hmmer.HmmerDomain

All Implemented Interfaces:

Serializable, Comparable<HmmerDomain>
```
public class HmmerDomain
extends Object
implements Comparable<HmmerDomain>, Serializable
```
Provides the details of a domain hit

Since:

3.0.3

Author:

Andreas Prlic

See Also:
Serialized Form

Constructor Summary

Constructors
Constructor and Description

HmmerDomain()

Constructors
Constructor and Description
`HmmerDomain()`

Method Summary

Methods
Modifier and Type	Method and Description
`int`	`compareTo(HmmerDomain o)`
`Integer`	`getAliLenth()`
`String`	`getHmmAcc()`
`String`	`getHmmDesc()`
`Integer`	`getHmmFrom()`
`String`	`getHmmName()`
`Integer`	`getHmmTo()`
`Integer`	`getSimCount()`
`Integer`	`getSqFrom()`
`Integer`	`getSqTo()`
`void`	`setAliLenth(Integer aliLenth)`
`void`	`setHmmAcc(String hmmAcc)`
`void`	`setHmmDesc(String hmmDesc)`
`void`	`setHmmFrom(Integer hmmFrom)`
`void`	`setHmmName(String hmmName)`
`void`	`setHmmTo(Integer hmmTo)`
`void`	`setSimCount(Integer simCount)`
`void`	`setSqFrom(Integer sqFrom)`
`void`	`setSqTo(Integer sqTo)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail
- HmmerDomain
```
public HmmerDomain()
```

Method Detail

getSqFrom
```
public Integer getSqFrom()
```

setSqFrom

public void setSqFrom(Integer sqFrom)

getSqTo
```
public Integer getSqTo()
```

setSqTo
```
public void setSqTo(Integer sqTo)
```

getAliLenth
```
public Integer getAliLenth()
```

setAliLenth

public void setAliLenth(Integer aliLenth)

getSimCount
```
public Integer getSimCount()
```

setSimCount

public void setSimCount(Integer simCount)

getHmmFrom
```
public Integer getHmmFrom()
```

setHmmFrom

public void setHmmFrom(Integer hmmFrom)

getHmmTo
```
public Integer getHmmTo()
```

setHmmTo
```
public void setHmmTo(Integer hmmTo)
```

getHmmName
```
public String getHmmName()
```

setHmmName

public void setHmmName(String hmmName)

getHmmDesc
```
public String getHmmDesc()
```

setHmmDesc

public void setHmmDesc(String hmmDesc)

getHmmAcc
```
public String getHmmAcc()
```

setHmmAcc
```
public void setHmmAcc(String hmmAcc)
```

toString
```
public String toString()
```
Overrides:

toString in class Object

compareTo
```
public int compareTo(HmmerDomain o)
```
Specified by:

compareTo in interface Comparable<HmmerDomain>

Class HmmerDomain

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

HmmerDomain

Method Detail

getSqFrom

setSqFrom

getSqTo

setSqTo

getAliLenth

setAliLenth

getSimCount

setSimCount

getHmmFrom

setHmmFrom

getHmmTo

setHmmTo

getHmmName

setHmmName

getHmmDesc

setHmmDesc

getHmmAcc

setHmmAcc

toString

compareTo