org.biojava.nbio.structure.gui

Class JmolViewerImpl

java.lang.Object

org.biojava.nbio.structure.gui.JmolViewerImpl

All Implemented Interfaces:

StructureViewer

public class JmolViewerImpl
extends Object
implements StructureViewer

Field Summary

Fields

Modifier and Type	Field and Description
static String	adapter
static String	smartAdapter
static String	viewer

Constructor Summary

Constructors

Constructor and Description
JmolViewerImpl()

Method Summary

Methods

Modifier and Type	Method and Description
void	clear() Clear the current display
Color	getColor()
Selection	getSelection()
void	repaint()
void	setColor(Color red) Apply this color to the current Selection
void	setSelection(Selection selection)
void	setStructure(Structure structure)
void	setStyle(RenderStyle wireframe) Apply this style to the current selection
void	setTitle(String label)
void	setZoom(int i) Set the Zoom level

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

viewer

public static final String viewer

See Also:

Constant Field Values

adapter

public static final String adapter

See Also:

Constant Field Values

smartAdapter

public static final String smartAdapter

See Also:

Constant Field Values

Constructor Detail

JmolViewerImpl

public JmolViewerImpl()

Method Detail

setTitle

public void setTitle(String label)

setStructure

public void setStructure(Structure structure)

Specified by:

setStructure in interface StructureViewer

clear

public void clear()

Description copied from interface: StructureViewer

Clear the current display

Specified by:

clear in interface StructureViewer

getColor

public Color getColor()

Specified by:

getColor in interface StructureViewer

getSelection

public Selection getSelection()

Specified by:

getSelection in interface StructureViewer

repaint

public void repaint()

Specified by:

repaint in interface StructureViewer

setColor

public void setColor(Color red)

Description copied from interface: StructureViewer

Apply this color to the current Selection

Specified by:

setColor in interface StructureViewer

setSelection

public void setSelection(Selection selection)

Specified by:

setSelection in interface StructureViewer

setStyle

public void setStyle(RenderStyle wireframe)

Description copied from interface: StructureViewer

Apply this style to the current selection

Specified by:

setStyle in interface StructureViewer

Parameters:

wireframe - renderstyle

setZoom

public void setZoom(int i)

Description copied from interface: StructureViewer

Set the Zoom level

Specified by:

setZoom in interface StructureViewer