| Package | Description |
|---|---|
| org.biojava.nbio.structure.align.gui.aligpanel | |
| org.biojava.nbio.structure.gui |
A few convenience classes to view protein structures with Jmol (if it is on the classpath),
to calculate a protein structure alignment and to investigate the internals of the protein structure alignment algorithm.
|
| org.biojava.nbio.structure.gui.events |
Some event classes for the protein structure GUIs.
|
| org.biojava.nbio.structure.gui.util |
Some utility classes for the protein structure GUIs.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AligPanel
A JPanel that can display an AFPChain in a nice way and interact with Jmol.
|
class |
StatusDisplay |
| Modifier and Type | Method and Description |
|---|---|
void |
AligPanel.addAlignmentPositionListener(AlignmentPositionListener li) |
void |
AligPanelMouseMotionListener.addAligPosListener(AlignmentPositionListener li) |
| Modifier and Type | Method and Description |
|---|---|
void |
SequenceDisplay.addAlignmentPositionListener(AlignmentPositionListener li) |
| Modifier and Type | Class and Description |
|---|---|
class |
JmolAlignedPositionListener |
| Modifier and Type | Method and Description |
|---|---|
void |
SequenceMouseListener.addAlignmentPositionListener(AlignmentPositionListener li) |
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