Uses of Class
org.biojava.nbio.structure.gui.util.AlignedPosition

Packages that use AlignedPosition

Package	Description
org.biojava.nbio.structure.align.gui.aligpanel
org.biojava.nbio.structure.gui
org.biojava.nbio.structure.gui.events
org.biojava.nbio.structure.gui.util

Uses of AlignedPosition in org.biojava.nbio.structure.align.gui.aligpanel

Methods in org.biojava.nbio.structure.align.gui.aligpanel with parameters of type AlignedPosition

Modifier and Type	Method and Description
void	MultipleAligPanel.mouseOverPosition(AlignedPosition p)
void	StatusDisplay.mouseOverPosition(AlignedPosition p)
void	AligPanel.mouseOverPosition(AlignedPosition p)
void	MultipleStatusDisplay.mouseOverPosition(AlignedPosition p)
void	MultipleAligPanel.positionSelected(AlignedPosition p)
void	StatusDisplay.positionSelected(AlignedPosition p)
void	AligPanel.positionSelected(AlignedPosition p)
void	MultipleStatusDisplay.positionSelected(AlignedPosition p)
void	MultipleAligPanel.rangeSelected(AlignedPosition start, AlignedPosition end)
void	StatusDisplay.rangeSelected(AlignedPosition start, AlignedPosition end)
void	AligPanel.rangeSelected(AlignedPosition start, AlignedPosition end)
void	MultipleStatusDisplay.rangeSelected(AlignedPosition start, AlignedPosition end)
void	MultipleAligPanel.toggleSelection(AlignedPosition p)
void	StatusDisplay.toggleSelection(AlignedPosition p)
void	AligPanel.toggleSelection(AlignedPosition p)
void	MultipleStatusDisplay.toggleSelection(AlignedPosition p)

Uses of AlignedPosition in org.biojava.nbio.structure.gui

Methods in org.biojava.nbio.structure.gui that return types with arguments of type AlignedPosition

Modifier and Type	Method and Description
List<AlignedPosition>	SequenceDisplay.getAligMap()

Uses of AlignedPosition in org.biojava.nbio.structure.gui.events

Methods in org.biojava.nbio.structure.gui.events with parameters of type AlignedPosition

Modifier and Type	Method and Description
void	JmolAlignedPositionListener.mouseOverPosition(AlignedPosition p)
void	AlignmentPositionListener.mouseOverPosition(AlignedPosition p)
void	JmolAlignedPositionListener.positionSelected(AlignedPosition p)
void	AlignmentPositionListener.positionSelected(AlignedPosition p)
void	JmolAlignedPositionListener.rangeSelected(AlignedPosition start, AlignedPosition end)
void	AlignmentPositionListener.rangeSelected(AlignedPosition start, AlignedPosition end)
void	JmolAlignedPositionListener.toggleSelection(AlignedPosition p)
void	AlignmentPositionListener.toggleSelection(AlignedPosition p)

Uses of AlignedPosition in org.biojava.nbio.structure.gui.util

Method parameters in org.biojava.nbio.structure.gui.util with type arguments of type AlignedPosition

Modifier and Type	Method and Description
void	SequenceScalePanel.setAligMap(List<AlignedPosition> apos)